Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fv4P11370 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fv4P11370 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.39□□□□□ -0.11
Fv4P11370 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.39□□□□□ -0.11
Fv4P11370 Gm18246-201ENSMUST00000221023 728 ntBASIC14.39□□□□□ -0.11
Fv4P11370 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.39□□□□□ -0.11
Fv4P11370 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fv4P11370 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fv4P11370 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.38□□□□□ -0.11
Fv4P11370 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.38□□□□□ -0.11
Fv4P11370 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.38□□□□□ -0.11
Fv4P11370 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.38□□□□□ -0.11
Fv4P11370 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Fv4P11370 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Fv4P11370 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.38□□□□□ -0.11
Fv4P11370 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fv4P11370 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fv4P11370 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.37□□□□□ -0.11
Fv4P11370 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fv4P11370 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.37□□□□□ -0.11
Fv4P11370 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.37□□□□□ -0.11
Fv4P11370 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fv4P11370 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fv4P11370 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fv4P11370 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms