Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ccl3P10855 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccl3P10855 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccl3P10855 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.1□□□□□ -0.31
Ccl3P10855 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ccl3P10855 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.09□□□□□ -0.31
Ccl3P10855 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm27631-201ENSMUST00000184163 466 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm2451-201ENSMUST00000199447 999 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm10290-201ENSMUST00000200451 999 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.09□□□□□ -0.31
Ccl3P10855 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Gm20445-201ENSMUST00000061905 565 ntBASIC13.09□□□□□ -0.31
Ccl3P10855 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccl3P10855 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl3P10855 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl3P10855 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl3P10855 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl3P10855 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl3P10855 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.08□□□□□ -0.32
Ccl3P10855 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Gm3436-201ENSMUST00000179930 840 ntBASIC13.08□□□□□ -0.32
Ccl3P10855 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.08□□□□□ -0.32
Ccl3P10855 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccl3P10855 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.08□□□□□ -0.32
Ccl3P10855 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.08□□□□□ -0.32
Ccl3P10855 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl3P10855 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccl3P10855 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.07□□□□□ -0.32
Ccl3P10855 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccl3P10855 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccl3P10855 Gm28631-201ENSMUST00000190740 334 ntBASIC13.07□□□□□ -0.32
Ccl3P10855 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.07□□□□□ -0.32
Ccl3P10855 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms