Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp6P0C0A3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Gm9727-201ENSMUST00000161387 555 ntBASIC16.22■□□□□ 0.19
Chmp6P0C0A3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Gm8000-201ENSMUST00000188378 592 ntBASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp6P0C0A3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp6P0C0A3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp6P0C0A3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp6P0C0A3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp6P0C0A3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp6P0C0A3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Gm11779-201ENSMUST00000118541 368 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Gm15467-201ENSMUST00000120582 445 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.2■□□□□ 0.18
Chmp6P0C0A3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp6P0C0A3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Gm5264-201ENSMUST00000190584 848 ntBASIC16.19■□□□□ 0.18
Chmp6P0C0A3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms