Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ApoeP08226 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ApoeP08226 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.1□□□□□ -0.15
ApoeP08226 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.1□□□□□ -0.15
ApoeP08226 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.1□□□□□ -0.15
ApoeP08226 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ApoeP08226 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.09□□□□□ -0.15
ApoeP08226 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ApoeP08226 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.09□□□□□ -0.15
ApoeP08226 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Gm15165-201ENSMUST00000118140 502 ntBASIC14.09□□□□□ -0.15
ApoeP08226 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.09□□□□□ -0.15
ApoeP08226 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.09□□□□□ -0.15
ApoeP08226 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ApoeP08226 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ApoeP08226 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ApoeP08226 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.08□□□□□ -0.15
ApoeP08226 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ApoeP08226 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ApoeP08226 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ApoeP08226 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.08□□□□□ -0.16
ApoeP08226 Gm25016-201ENSMUST00000158399 131 ntBASIC14.08□□□□□ -0.16
ApoeP08226 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ApoeP08226 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ApoeP08226 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms