Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Gm28631-201ENSMUST00000190740 334 ntBASIC18.06■□□□□ 0.48
Col4a1P02463 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.06■□□□□ 0.48
Col4a1P02463 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.06■□□□□ 0.48
Col4a1P02463 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Carlr-201ENSMUST00000181515 2574 ntBASIC18.05■□□□□ 0.48
Col4a1P02463 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col4a1P02463 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col4a1P02463 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col4a1P02463 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Gm37917-201ENSMUST00000194711 392 ntBASIC18.05■□□□□ 0.48
Col4a1P02463 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col4a1P02463 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col4a1P02463 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a1P02463 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.04■□□□□ 0.48
Col4a1P02463 Mir7085-201ENSMUST00000184353 66 ntBASIC18.04■□□□□ 0.48
Col4a1P02463 AA619741-201ENSMUST00000195095 646 ntBASIC18.04■□□□□ 0.48
Col4a1P02463 Gm9182-201ENSMUST00000217829 639 ntBASIC18.04■□□□□ 0.48
Col4a1P02463 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.04■□□□□ 0.48
Col4a1P02463 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col4a1P02463 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a1P02463 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Col4a1P02463 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.03■□□□□ 0.48
Col4a1P02463 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.03■□□□□ 0.48
Col4a1P02463 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.03■□□□□ 0.48
Col4a1P02463 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.03■□□□□ 0.48
Col4a1P02463 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.03■□□□□ 0.48
Col4a1P02463 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a1P02463 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.02■□□□□ 0.48
Col4a1P02463 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.02■□□□□ 0.48
Col4a1P02463 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col4a1P02463 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Col4a1P02463 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a1P02463 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.02■□□□□ 0.47
Col4a1P02463 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms