Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.9□□□□□ -0.66
TcraP01849 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.9□□□□□ -0.66
TcraP01849 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TcraP01849 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TcraP01849 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.9□□□□□ -0.66
TcraP01849 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.9□□□□□ -0.66
TcraP01849 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TcraP01849 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TcraP01849 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.9□□□□□ -0.66
TcraP01849 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TcraP01849 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TcraP01849 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.9□□□□□ -0.67
TcraP01849 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TcraP01849 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.89□□□□□ -0.67
TcraP01849 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.89□□□□□ -0.67
TcraP01849 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.89□□□□□ -0.67
TcraP01849 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.89□□□□□ -0.67
TcraP01849 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.89□□□□□ -0.67
TcraP01849 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
TcraP01849 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TcraP01849 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.89□□□□□ -0.67
TcraP01849 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TcraP01849 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
TcraP01849 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TcraP01849 Gm6433-201ENSMUST00000118634 875 ntBASIC10.88□□□□□ -0.67
TcraP01849 Gm15565-201ENSMUST00000118890 427 ntBASIC10.88□□□□□ -0.67
TcraP01849 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.88□□□□□ -0.67
TcraP01849 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms