Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.04■□□□□ 0.16
Vti1aO89116 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Vti1aO89116 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Vti1aO89116 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Gm24158-201ENSMUST00000175263 71 ntBASIC16.04■□□□□ 0.16
Vti1aO89116 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Gm2272-201ENSMUST00000194903 582 ntBASIC16.04■□□□□ 0.16
Vti1aO89116 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.04■□□□□ 0.16
Vti1aO89116 Gm18057-201ENSMUST00000208220 503 ntBASIC16.04■□□□□ 0.16
Vti1aO89116 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vti1aO89116 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vti1aO89116 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Vti1aO89116 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Vti1aO89116 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.03■□□□□ 0.16
Vti1aO89116 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.03■□□□□ 0.16
Vti1aO89116 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.03■□□□□ 0.16
Vti1aO89116 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.03■□□□□ 0.16
Vti1aO89116 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.03■□□□□ 0.16
Vti1aO89116 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vti1aO89116 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.03■□□□□ 0.16
Vti1aO89116 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Vti1aO89116 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vti1aO89116 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vti1aO89116 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.02■□□□□ 0.16
Vti1aO89116 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.02■□□□□ 0.16
Vti1aO89116 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.02■□□□□ 0.16
Vti1aO89116 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.02■□□□□ 0.16
Vti1aO89116 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Vti1aO89116 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.02■□□□□ 0.16
Vti1aO89116 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.02■□□□□ 0.16
Vti1aO89116 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.02■□□□□ 0.16
Vti1aO89116 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vti1aO89116 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.02■□□□□ 0.16
Vti1aO89116 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vti1aO89116 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vti1aO89116 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Vti1aO89116 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.02■□□□□ 0.15
Vti1aO89116 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Vti1aO89116 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.01■□□□□ 0.15
Vti1aO89116 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vti1aO89116 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms