Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hcn3O88705 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Hcn3O88705 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.27□□□□□ -0.12
Hcn3O88705 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hcn3O88705 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hcn3O88705 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Hcn3O88705 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.27□□□□□ -0.13
Hcn3O88705 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
Hcn3O88705 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.27□□□□□ -0.13
Hcn3O88705 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hcn3O88705 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hcn3O88705 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.26□□□□□ -0.13
Hcn3O88705 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.26□□□□□ -0.13
Hcn3O88705 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hcn3O88705 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.26□□□□□ -0.13
Hcn3O88705 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.26□□□□□ -0.13
Hcn3O88705 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.26□□□□□ -0.13
Hcn3O88705 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hcn3O88705 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hcn3O88705 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Matn2-206ENSMUST00000228570 2798 ntBASIC14.26□□□□□ -0.13
Hcn3O88705 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hcn3O88705 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.25□□□□□ -0.13
Hcn3O88705 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.25□□□□□ -0.13
Hcn3O88705 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Rprl3-201ENSMUST00000157400 290 ntBASIC14.25□□□□□ -0.13
Hcn3O88705 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hcn3O88705 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hcn3O88705 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hcn3O88705 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hcn3O88705 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.24□□□□□ -0.13
Hcn3O88705 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.24□□□□□ -0.13
Hcn3O88705 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.24□□□□□ -0.13
Hcn3O88705 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms