Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.22□□□□□ -0.13
Vti1bO88384 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vti1bO88384 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Vti1bO88384 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.21□□□□□ -0.13
Vti1bO88384 Gm11452-201ENSMUST00000122376 690 ntBASIC14.21□□□□□ -0.13
Vti1bO88384 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.21□□□□□ -0.13
Vti1bO88384 Gm27741-201ENSMUST00000185060 237 ntBASIC14.21□□□□□ -0.13
Vti1bO88384 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vti1bO88384 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.21□□□□□ -0.13
Vti1bO88384 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vti1bO88384 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vti1bO88384 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.21□□□□□ -0.14
Vti1bO88384 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1bO88384 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.21□□□□□ -0.14
Vti1bO88384 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vti1bO88384 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vti1bO88384 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vti1bO88384 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.2□□□□□ -0.14
Vti1bO88384 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.2□□□□□ -0.14
Vti1bO88384 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.2□□□□□ -0.14
Vti1bO88384 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.2□□□□□ -0.14
Vti1bO88384 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.2□□□□□ -0.14
Vti1bO88384 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Vti1bO88384 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.2□□□□□ -0.14
Vti1bO88384 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vti1bO88384 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vti1bO88384 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vti1bO88384 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm25990-201ENSMUST00000102440 86 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm13884-201ENSMUST00000118103 829 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Gm15358-201ENSMUST00000119249 520 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm7862-201ENSMUST00000121461 292 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm6089-201ENSMUST00000197666 938 ntBASIC14.19□□□□□ -0.14
Vti1bO88384 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Vti1bO88384 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vti1bO88384 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vti1bO88384 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms