Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.4■□□□□ 0.22
Stra6O70491 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.4■□□□□ 0.22
Stra6O70491 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Gm2423-201ENSMUST00000074863 733 ntBASIC16.4■□□□□ 0.22
Stra6O70491 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.4■□□□□ 0.22
Stra6O70491 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Stra6O70491 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Stra6O70491 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Stra6O70491 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Stra6O70491 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Stra6O70491 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.39■□□□□ 0.21
Stra6O70491 Gm5566-201ENSMUST00000116118 459 ntBASIC16.39■□□□□ 0.21
Stra6O70491 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.39■□□□□ 0.21
Stra6O70491 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.39■□□□□ 0.21
Stra6O70491 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Stra6O70491 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.39■□□□□ 0.21
Stra6O70491 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Stra6O70491 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Stra6O70491 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.38■□□□□ 0.21
Stra6O70491 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.38■□□□□ 0.21
Stra6O70491 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.38■□□□□ 0.21
Stra6O70491 Gm7775-201ENSMUST00000218871 853 ntBASIC16.38■□□□□ 0.21
Stra6O70491 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Stra6O70491 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Stra6O70491 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Stra6O70491 BC037039-201ENSMUST00000192003 2205 ntBASIC16.38■□□□□ 0.21
Stra6O70491 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Stra6O70491 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.37■□□□□ 0.21
Stra6O70491 Gm15487-201ENSMUST00000122373 465 ntBASIC16.37■□□□□ 0.21
Stra6O70491 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.37■□□□□ 0.21
Stra6O70491 Shd-206ENSMUST00000225145 998 ntBASIC16.37■□□□□ 0.21
Stra6O70491 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Stra6O70491 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Stra6O70491 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.36■□□□□ 0.21
Stra6O70491 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.36■□□□□ 0.21
Stra6O70491 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Stra6O70491 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stra6O70491 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.36■□□□□ 0.21
Stra6O70491 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Stra6O70491 Gm9719-201ENSMUST00000162765 543 ntBASIC16.36■□□□□ 0.21
Stra6O70491 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Mir7684-201ENSMUST00000183858 60 ntBASIC16.36■□□□□ 0.21
Stra6O70491 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.36■□□□□ 0.21
Stra6O70491 Gm45098-201ENSMUST00000207179 657 ntBASIC16.36■□□□□ 0.21
Stra6O70491 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Stra6O70491 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Stra6O70491 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Stra6O70491 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms