Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Gm6659-201ENSMUST00000174752 547 ntBASIC13.5□□□□□ -0.25
Pdlim3O70209 Gm43767-201ENSMUST00000198933 381 ntBASIC13.5□□□□□ -0.25
Pdlim3O70209 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pdlim3O70209 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.5□□□□□ -0.25
Pdlim3O70209 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim3O70209 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim3O70209 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.49□□□□□ -0.25
Pdlim3O70209 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm8097-201ENSMUST00000117903 829 ntBASIC13.49□□□□□ -0.25
Pdlim3O70209 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim3O70209 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim3O70209 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.49□□□□□ -0.25
Pdlim3O70209 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim3O70209 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim3O70209 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim3O70209 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim3O70209 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim3O70209 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms