Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
Rdh5O55240 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rdh5O55240 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rdh5O55240 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Rdh5O55240 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.11□□□□□ -0.15
Rdh5O55240 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Gm11594-201ENSMUST00000122313 162 ntBASIC14.11□□□□□ -0.15
Rdh5O55240 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.11□□□□□ -0.15
Rdh5O55240 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rdh5O55240 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rdh5O55240 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rdh5O55240 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Rdh5O55240 Gm12260-201ENSMUST00000122447 411 ntBASIC14.1□□□□□ -0.15
Rdh5O55240 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.1□□□□□ -0.15
Rdh5O55240 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rdh5O55240 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.1□□□□□ -0.15
Rdh5O55240 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.1□□□□□ -0.15
Rdh5O55240 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Rdh5O55240 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh5O55240 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rdh5O55240 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.1□□□□□ -0.15
Rdh5O55240 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.09□□□□□ -0.15
Rdh5O55240 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.09□□□□□ -0.15
Rdh5O55240 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.09□□□□□ -0.15
Rdh5O55240 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.09□□□□□ -0.15
Rdh5O55240 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Rdh5O55240 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh5O55240 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Rdh5O55240 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
Rdh5O55240 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh5O55240 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh5O55240 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Rdh5O55240 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms