Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.31■□□□□ 0.2
Trdmt1O55055 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Gm14928-201ENSMUST00000120198 477 ntBASIC16.31■□□□□ 0.2
Trdmt1O55055 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Gm45453-201ENSMUST00000211758 853 ntBASIC16.31■□□□□ 0.2
Trdmt1O55055 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.31■□□□□ 0.2
Trdmt1O55055 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.31■□□□□ 0.2
Trdmt1O55055 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdmt1O55055 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.31■□□□□ 0.2
Trdmt1O55055 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm20445-201ENSMUST00000061905 565 ntBASIC16.3■□□□□ 0.2
Trdmt1O55055 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trdmt1O55055 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdmt1O55055 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Gm37230-201ENSMUST00000194491 818 ntBASIC16.29■□□□□ 0.2
Trdmt1O55055 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Olfr286-202ENSMUST00000205305 969 ntBASIC16.29■□□□□ 0.2
Trdmt1O55055 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trdmt1O55055 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdmt1O55055 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms