Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gm27622-201ENSMUST00000183779 60 ntBASIC12.57□□□□□ -0.4
Cxcl13O55038 Mir7023-201ENSMUST00000185093 64 ntBASIC12.57□□□□□ -0.4
Cxcl13O55038 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.57□□□□□ -0.4
Cxcl13O55038 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.56□□□□□ -0.4
Cxcl13O55038 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.56□□□□□ -0.4
Cxcl13O55038 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm13015-201ENSMUST00000118674 204 ntBASIC12.56□□□□□ -0.4
Cxcl13O55038 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm20949-201ENSMUST00000206478 952 ntBASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.56□□□□□ -0.4
Cxcl13O55038 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl13O55038 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl13O55038 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl13O55038 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cxcl13O55038 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm8410-201ENSMUST00000117225 605 ntBASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm5479-201ENSMUST00000160578 435 ntBASIC12.55□□□□□ -0.4
Cxcl13O55038 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.55□□□□□ -0.4
Cxcl13O55038 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.55□□□□□ -0.4
Cxcl13O55038 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cxcl13O55038 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms