Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.83□□□□□ -0.2
BckdkO55028 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.83□□□□□ -0.2
BckdkO55028 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BckdkO55028 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
BckdkO55028 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.82□□□□□ -0.2
BckdkO55028 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Gm17271-201ENSMUST00000165535 355 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Gm27300-201ENSMUST00000184085 97 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Gm27335-201ENSMUST00000184758 97 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.82□□□□□ -0.2
BckdkO55028 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Gm10175-201ENSMUST00000086013 645 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
BckdkO55028 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BckdkO55028 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.82□□□□□ -0.2
BckdkO55028 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.82□□□□□ -0.2
BckdkO55028 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.81□□□□□ -0.2
BckdkO55028 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
BckdkO55028 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Gm25925-201ENSMUST00000158314 306 ntBASIC13.81□□□□□ -0.2
BckdkO55028 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.81□□□□□ -0.2
BckdkO55028 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
BckdkO55028 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BckdkO55028 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
BckdkO55028 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.8□□□□□ -0.2
BckdkO55028 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.8□□□□□ -0.2
BckdkO55028 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.8□□□□□ -0.2
BckdkO55028 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
BckdkO55028 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.8□□□□□ -0.2
BckdkO55028 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms