Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1bO55017 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.34□□□□□ -0.11
Cacna1bO55017 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cacna1bO55017 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cacna1bO55017 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacna1bO55017 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacna1bO55017 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.33□□□□□ -0.12
Cacna1bO55017 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Gm18624-201ENSMUST00000220966 658 ntBASIC14.33□□□□□ -0.12
Cacna1bO55017 Dupd1-202ENSMUST00000224735 548 ntBASIC14.33□□□□□ -0.12
Cacna1bO55017 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1bO55017 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cacna1bO55017 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Mir6420-201ENSMUST00000185032 102 ntBASIC14.32□□□□□ -0.12
Cacna1bO55017 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.32□□□□□ -0.12
Cacna1bO55017 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Gm21854-201ENSMUST00000179901 471 ntBASIC14.32□□□□□ -0.12
Cacna1bO55017 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacna1bO55017 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.32□□□□□ -0.12
Cacna1bO55017 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cacna1bO55017 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1bO55017 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.31□□□□□ -0.12
Cacna1bO55017 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.31□□□□□ -0.12
Cacna1bO55017 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.31□□□□□ -0.12
Cacna1bO55017 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.31□□□□□ -0.12
Cacna1bO55017 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms