Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prom1O54990 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Prom1O54990 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prom1O54990 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.36■□□□□ 0.21
Prom1O54990 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Prom1O54990 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Prom1O54990 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.35■□□□□ 0.21
Prom1O54990 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Prom1O54990 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.35■□□□□ 0.21
Prom1O54990 Gm27838-201ENSMUST00000184829 128 ntBASIC16.35■□□□□ 0.21
Prom1O54990 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.35■□□□□ 0.21
Prom1O54990 Gm43703-201ENSMUST00000200523 763 ntBASIC16.35■□□□□ 0.21
Prom1O54990 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Prom1O54990 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prom1O54990 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Prom1O54990 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prom1O54990 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prom1O54990 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.34■□□□□ 0.21
Prom1O54990 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.34■□□□□ 0.21
Prom1O54990 Gm13464-201ENSMUST00000119418 935 ntBASIC16.34■□□□□ 0.21
Prom1O54990 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Gm2451-201ENSMUST00000199447 999 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Gm10290-201ENSMUST00000200451 999 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Gm7653-201ENSMUST00000214567 508 ntBASIC16.34■□□□□ 0.21
Prom1O54990 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.34■□□□□ 0.21
Prom1O54990 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Prom1O54990 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.34■□□□□ 0.21
Prom1O54990 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.34■□□□□ 0.21
Prom1O54990 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Prom1O54990 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prom1O54990 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prom1O54990 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prom1O54990 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prom1O54990 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prom1O54990 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prom1O54990 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prom1O54990 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prom1O54990 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Prom1O54990 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Prom1O54990 Gm29310-201ENSMUST00000185468 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21825-201ENSMUST00000185728 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm29109-201ENSMUST00000185895 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21896-201ENSMUST00000186520 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21873-201ENSMUST00000186728 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21794-201ENSMUST00000187056 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21880-201ENSMUST00000187275 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21826-201ENSMUST00000187451 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21198-201ENSMUST00000188393 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21749-201ENSMUST00000189343 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21901-201ENSMUST00000189568 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm29424-201ENSMUST00000189716 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm28599-201ENSMUST00000189838 694 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21867-201ENSMUST00000189917 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm29269-201ENSMUST00000190087 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21722-201ENSMUST00000190153 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm28423-201ENSMUST00000190701 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21899-201ENSMUST00000190745 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21910-201ENSMUST00000191163 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21849-201ENSMUST00000191571 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm28678-201ENSMUST00000191593 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm20910-201ENSMUST00000193268 696 ntBASIC16.33■□□□□ 0.2
Prom1O54990 Gm21871-201ENSMUST00000194621 696 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms