Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Stx1aO35526 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Stx1aO35526 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Stx1aO35526 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.75■□□□□ 0.27
Stx1aO35526 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.75■□□□□ 0.27
Stx1aO35526 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.75■□□□□ 0.27
Stx1aO35526 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Stx1aO35526 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Stx1aO35526 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Stx1aO35526 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Stx1aO35526 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Stx1aO35526 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.74■□□□□ 0.27
Stx1aO35526 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.74■□□□□ 0.27
Stx1aO35526 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Stx1aO35526 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Stx1aO35526 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stx1aO35526 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.74■□□□□ 0.27
Stx1aO35526 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Stx1aO35526 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Stx1aO35526 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Stx1aO35526 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.73■□□□□ 0.27
Stx1aO35526 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.73■□□□□ 0.27
Stx1aO35526 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Stx1aO35526 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Stx1aO35526 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Stx1aO35526 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Stx1aO35526 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stx1aO35526 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Stx1aO35526 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Stx1aO35526 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.72■□□□□ 0.27
Stx1aO35526 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Gm6296-201ENSMUST00000222599 943 ntBASIC16.72■□□□□ 0.27
Stx1aO35526 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Stx1aO35526 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Stx1aO35526 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Stx1aO35526 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stx1aO35526 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms