Protein–RNA interactions for Protein: O35464

Sema6a, Semaphorin-6A, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6aO35464 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sema6aO35464 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Sema6aO35464 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sema6aO35464 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.29□□□□□ -0.12
Sema6aO35464 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.29□□□□□ -0.12
Sema6aO35464 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Sema6aO35464 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.29□□□□□ -0.12
Sema6aO35464 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.29□□□□□ -0.12
Sema6aO35464 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.29□□□□□ -0.12
Sema6aO35464 Carlr-201ENSMUST00000181515 2574 ntBASIC14.29□□□□□ -0.12
Sema6aO35464 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sema6aO35464 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sema6aO35464 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.28□□□□□ -0.12
Sema6aO35464 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
Sema6aO35464 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.28□□□□□ -0.12
Sema6aO35464 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.28□□□□□ -0.12
Sema6aO35464 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.28□□□□□ -0.12
Sema6aO35464 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sema6aO35464 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sema6aO35464 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sema6aO35464 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sema6aO35464 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.27□□□□□ -0.12
Sema6aO35464 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.27□□□□□ -0.12
Sema6aO35464 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sema6aO35464 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sema6aO35464 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.27□□□□□ -0.12
Sema6aO35464 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.27□□□□□ -0.12
Sema6aO35464 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sema6aO35464 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sema6aO35464 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Sema6aO35464 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sema6aO35464 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sema6aO35464 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sema6aO35464 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms