Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.28□□□□□ -0.28
Alx4O35137 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.28□□□□□ -0.28
Alx4O35137 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.28□□□□□ -0.28
Alx4O35137 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.28□□□□□ -0.28
Alx4O35137 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.28□□□□□ -0.28
Alx4O35137 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Alx4O35137 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Alx4O35137 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Alx4O35137 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Alx4O35137 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.27□□□□□ -0.28
Alx4O35137 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Alx4O35137 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.27□□□□□ -0.28
Alx4O35137 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Alx4O35137 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Alx4O35137 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx4O35137 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.27□□□□□ -0.29
Alx4O35137 Gm18489-201ENSMUST00000172565 551 ntBASIC13.27□□□□□ -0.29
Alx4O35137 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.27□□□□□ -0.29
Alx4O35137 Gm27704-201ENSMUST00000185094 107 ntBASIC13.27□□□□□ -0.29
Alx4O35137 Gm7977-201ENSMUST00000193787 748 ntBASIC13.27□□□□□ -0.29
Alx4O35137 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.27□□□□□ -0.29
Alx4O35137 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Alx4O35137 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Alx4O35137 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Alx4O35137 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Alx4O35137 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.27□□□□□ -0.29
Alx4O35137 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Alx4O35137 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx4O35137 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Alx4O35137 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Alx4O35137 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.26□□□□□ -0.29
Alx4O35137 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms