Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
B020004C17RikJ3QP07 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
B020004C17RikJ3QP07 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
B020004C17RikJ3QP07 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
B020004C17RikJ3QP07 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
B020004C17RikJ3QP07 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Gm11918-201ENSMUST00000121660 179 ntBASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
B020004C17RikJ3QP07 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Gm8602-201ENSMUST00000184045 607 ntBASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Mir6392-201ENSMUST00000184924 108 ntBASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.5■□□□□ 0.23
B020004C17RikJ3QP07 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Gm13829-201ENSMUST00000119600 138 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms