Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Gm8318-201ENSMUST00000182954 872 ntBASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Gm27867-201ENSMUST00000184778 125 ntBASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.59□□□□□ -0.23
Shisa8J3QNX5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Shisa8J3QNX5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.58□□□□□ -0.23
Shisa8J3QNX5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Shisa8J3QNX5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm4459-201ENSMUST00000118750 468 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm8344-201ENSMUST00000119813 856 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Rprl3-201ENSMUST00000157400 290 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm10231-201ENSMUST00000181584 441 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm10175-202ENSMUST00000208752 441 ntBASIC13.58□□□□□ -0.24
Shisa8J3QNX5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shisa8J3QNX5 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms