Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Gm24513-201ENSMUST00000174964 138 ntBASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Gm2272-201ENSMUST00000194903 582 ntBASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh11xF6ZNL5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Gm13464-201ENSMUST00000119418 935 ntBASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Mir3113-201ENSMUST00000175478 76 ntBASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Gm27397-201ENSMUST00000184997 107 ntBASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdh11xF6ZNL5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh11xF6ZNL5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms