Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.3■□□□□ 0.04
Atf6F6VAN0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.29■□□□□ 0.04
Atf6F6VAN0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf6F6VAN0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.28■□□□□ 0.04
Atf6F6VAN0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf6F6VAN0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Gm18733-201ENSMUST00000173950 856 ntBASIC15.27■□□□□ 0.04
Atf6F6VAN0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.27■□□□□ 0.04
Atf6F6VAN0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf6F6VAN0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf6F6VAN0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Atf6F6VAN0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms