Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Gm2272-201ENSMUST00000194903 582 ntBASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
R3hdm1E9Q9Q2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Gm16215-201ENSMUST00000161990 637 ntBASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Gm44855-201ENSMUST00000205725 362 ntBASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.41■□□□□ 0.22
R3hdm1E9Q9Q2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
R3hdm1E9Q9Q2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Gm12490-201ENSMUST00000120255 560 ntBASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Gm9824-201ENSMUST00000178707 561 ntBASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Gm43433-201ENSMUST00000196573 481 ntBASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
R3hdm1E9Q9Q2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms