Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Dupd1-202ENSMUST00000224735 548 ntBASIC17.81■□□□□ 0.44
Ube4aE9Q735 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ube4aE9Q735 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4aE9Q735 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4aE9Q735 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.79■□□□□ 0.44
Ube4aE9Q735 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Gm16215-201ENSMUST00000161990 637 ntBASIC17.79■□□□□ 0.44
Ube4aE9Q735 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube4aE9Q735 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gm7488-201ENSMUST00000117148 684 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.78■□□□□ 0.44
Ube4aE9Q735 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gm45453-201ENSMUST00000211758 853 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.78■□□□□ 0.44
Ube4aE9Q735 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube4aE9Q735 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gm15321-201ENSMUST00000121290 288 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gm43703-201ENSMUST00000200523 763 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gm46209-201ENSMUST00000217912 553 ntBASIC17.77■□□□□ 0.44
Ube4aE9Q735 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube4aE9Q735 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms