Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm44350-201ENSMUST00000197197 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44390-201ENSMUST00000197533 144 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44313-201ENSMUST00000198018 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44486-201ENSMUST00000198508 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44314-201ENSMUST00000199263 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44394-201ENSMUST00000199558 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44484-201ENSMUST00000199873 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44466-201ENSMUST00000200264 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44359-201ENSMUST00000200671 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm19164-201ENSMUST00000210667 640 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm10355-201ENSMUST00000097146 517 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm28043E0CXC2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Gm28043E0CXC2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Gm28043E0CXC2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Gm11780-201ENSMUST00000136880 516 ntBASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms