Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim30cD3YVI9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim30cD3YVI9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim30cD3YVI9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim30cD3YVI9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim30cD3YVI9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim30cD3YVI9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Gm8344-201ENSMUST00000119813 856 ntBASIC16.28■□□□□ 0.2
Trim30cD3YVI9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim30cD3YVI9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Efs-202ENSMUST00000227037 2540 ntBASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim30cD3YVI9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim30cD3YVI9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms