Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm27321-201ENSMUST00000185021 205 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm29310-201ENSMUST00000185468 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21825-201ENSMUST00000185728 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm29109-201ENSMUST00000185895 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21896-201ENSMUST00000186520 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21873-201ENSMUST00000186728 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21794-201ENSMUST00000187056 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21880-201ENSMUST00000187275 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21826-201ENSMUST00000187451 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21198-201ENSMUST00000188393 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21749-201ENSMUST00000189343 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21901-201ENSMUST00000189568 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm29424-201ENSMUST00000189716 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm28599-201ENSMUST00000189838 694 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21867-201ENSMUST00000189917 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm29269-201ENSMUST00000190087 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21722-201ENSMUST00000190153 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm28423-201ENSMUST00000190701 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21899-201ENSMUST00000190745 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21910-201ENSMUST00000191163 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21849-201ENSMUST00000191571 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm28678-201ENSMUST00000191593 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm20910-201ENSMUST00000193268 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm21871-201ENSMUST00000194621 696 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Chd3B1AR17 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chd3B1AR17 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Chd3B1AR17 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.57□□□□□ -0.08
Chd3B1AR17 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Gm27618-201ENSMUST00000183671 60 ntBASIC14.57□□□□□ -0.08
Chd3B1AR17 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chd3B1AR17 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd3B1AR17 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd3B1AR17 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.56□□□□□ -0.08
Chd3B1AR17 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.56□□□□□ -0.08
Chd3B1AR17 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chd3B1AR17 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd3B1AR17 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Chd3B1AR17 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.55□□□□□ -0.08
Chd3B1AR17 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chd3B1AR17 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.55□□□□□ -0.08
Chd3B1AR17 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.55□□□□□ -0.08
Chd3B1AR17 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chd3B1AR17 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd3B1AR17 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms