Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc112A0AUP1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.02■□□□□ 0.31
Ccdc112A0AUP1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc112A0AUP1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc112A0AUP1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc112A0AUP1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Birc2-201ENSMUST00000054878 378 ntBASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc112A0AUP1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17■□□□□ 0.31
Ccdc112A0AUP1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17■□□□□ 0.31
Ccdc112A0AUP1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 AC147366.1-201ENSMUST00000227671 852 ntBASIC17■□□□□ 0.31
Ccdc112A0AUP1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc112A0AUP1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc112A0AUP1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms