Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13d-4A0A0G2JFX3 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm4459-201ENSMUST00000118750 468 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm8344-201ENSMUST00000119813 856 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm6659-201ENSMUST00000174752 547 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms