Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13n-1A0A0G2JEU8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms