Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm22697-201ENSMUST00000175194 63 ntBASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3n-3A0A0G2JEM0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms