Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav6n-6A0A075B6B2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav6n-6A0A075B6B2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms