Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.22□□□□□ -0.45
Trav18A0A075B656 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.22□□□□□ -0.45
Trav18A0A075B656 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Ank2-226ENSMUST00000189368 339 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm43767-201ENSMUST00000198933 381 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.21□□□□□ -0.45
Trav18A0A075B656 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav18A0A075B656 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.21□□□□□ -0.46
Trav18A0A075B656 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Trav18A0A075B656 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav18A0A075B656 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.2□□□□□ -0.46
Trav18A0A075B656 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.2□□□□□ -0.46
Trav18A0A075B656 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms