Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms