Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Gm15321-201ENSMUST00000121290 288 ntBASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8n-2A0A075B633 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm12859-201ENSMUST00000117834 427 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Mir1897-201ENSMUST00000122581 272 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm45098-201ENSMUST00000207179 657 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm46209-201ENSMUST00000217912 553 ntBASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8n-2A0A075B633 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Gm12490-201ENSMUST00000120255 560 ntBASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Gm3436-201ENSMUST00000179930 840 ntBASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8n-2A0A075B633 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms