Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Gm43347-201ENSMUST00000200226 580 ntBASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9-1A0A075B601 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9-1A0A075B601 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav9-1A0A075B601 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9-1A0A075B601 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9-1A0A075B601 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9-1A0A075B601 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9-1A0A075B601 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9-1A0A075B601 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9-1A0A075B601 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9-1A0A075B601 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms