Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-1A0A075B5Z8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-1A0A075B5Z8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm27646-201ENSMUST00000183989 110 ntBASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav6-1A0A075B5Z8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms