Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2afb3S4R1G7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Gm11780-201ENSMUST00000136880 516 ntBASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H2afb3S4R1G7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Gm10499-201ENSMUST00000174094 934 ntBASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb3S4R1G7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms