Protein–RNA interactions for Protein: Q9Z260

Cldn8, Claudin-8, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn8Q9Z260 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cldn8Q9Z260 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Gm7862-201ENSMUST00000121461 292 ntBASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Gm15173-201ENSMUST00000122049 433 ntBASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn8Q9Z260 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn8Q9Z260 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.15
Cldn8Q9Z260 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Gm4899-201ENSMUST00000178708 719 ntBASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Gm18246-201ENSMUST00000221023 728 ntBASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn8Q9Z260 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms