Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn9Q9Z0S7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn9Q9Z0S7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn9Q9Z0S7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms