Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClcnkaQ9WUB7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClcnkaQ9WUB7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClcnkaQ9WUB7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ClcnkaQ9WUB7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClcnkaQ9WUB7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClcnkaQ9WUB7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms