Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.62□□□□□ -0.55
CcsQ9WU84 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Gm18421-201ENSMUST00000204122 625 ntBASIC11.61□□□□□ -0.55
CcsQ9WU84 Gm18669-201ENSMUST00000216049 778 ntBASIC11.61□□□□□ -0.55
CcsQ9WU84 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.61□□□□□ -0.55
CcsQ9WU84 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CcsQ9WU84 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CcsQ9WU84 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.6□□□□□ -0.55
CcsQ9WU84 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.6□□□□□ -0.55
CcsQ9WU84 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.6□□□□□ -0.55
CcsQ9WU84 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.6□□□□□ -0.55
CcsQ9WU84 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.6□□□□□ -0.55
CcsQ9WU84 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.6□□□□□ -0.55
CcsQ9WU84 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CcsQ9WU84 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms