Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atp6ap1Q9R1Q9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atp6ap1Q9R1Q9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atp6ap1Q9R1Q9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atp6ap1Q9R1Q9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Atp6ap1Q9R1Q9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Atp6ap1Q9R1Q9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atp6ap1Q9R1Q9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms