Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.71□□□□□ -0.38
Col13a1Q9R1N9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 App-207ENSMUST00000227737 2827 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm25287-201ENSMUST00000103846 110 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm22918-201ENSMUST00000103855 110 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm7488-201ENSMUST00000117148 684 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col13a1Q9R1N9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm8410-201ENSMUST00000117225 605 ntBASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col13a1Q9R1N9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms