Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm7862-201ENSMUST00000121461 292 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm11780-201ENSMUST00000136880 516 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44357-201ENSMUST00000195897 142 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm19658-201ENSMUST00000196231 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44367-201ENSMUST00000196836 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44350-201ENSMUST00000197197 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44390-201ENSMUST00000197533 144 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm6089-201ENSMUST00000197666 938 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44313-201ENSMUST00000198018 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44486-201ENSMUST00000198508 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44314-201ENSMUST00000199263 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44394-201ENSMUST00000199558 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44484-201ENSMUST00000199873 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44466-201ENSMUST00000200264 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Gm44359-201ENSMUST00000200671 138 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.18■□□□□ 0.02
RpgrQ9R0X5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RpgrQ9R0X5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 BC037039-201ENSMUST00000192003 2205 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm13884-201ENSMUST00000118103 829 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm11452-201ENSMUST00000122376 690 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm7230-201ENSMUST00000173026 815 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RpgrQ9R0X5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RpgrQ9R0X5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms