Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 AV026068-213ENSMUST00000223675 1171 ntBASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcn2Q9R0A1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gm15173-201ENSMUST00000122049 433 ntBASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gm19164-201ENSMUST00000210667 640 ntBASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clcn2Q9R0A1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcn2Q9R0A1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms