Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm14140-201ENSMUST00000119999 995 ntBASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.25□□□□□ -0.29
Nubp2Q9R061 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp2Q9R061 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.24□□□□□ -0.29
Nubp2Q9R061 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.24□□□□□ -0.29
Nubp2Q9R061 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Gm5682-201ENSMUST00000173402 505 ntBASIC13.24□□□□□ -0.29
Nubp2Q9R061 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.24□□□□□ -0.29
Nubp2Q9R061 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.24□□□□□ -0.29
Nubp2Q9R061 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp2Q9R061 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nubp2Q9R061 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp2Q9R061 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms