Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nubp1Q9R060 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.16□□□□□ -0.3
Nubp1Q9R060 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.16□□□□□ -0.3
Nubp1Q9R060 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gm17790-201ENSMUST00000191545 1228 ntBASIC13.16□□□□□ -0.3
Nubp1Q9R060 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nubp1Q9R060 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm18187-201ENSMUST00000196476 984 ntBASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm43433-201ENSMUST00000196573 481 ntBASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm18377-201ENSMUST00000215141 607 ntBASIC13.15□□□□□ -0.3
Nubp1Q9R060 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.15□□□□□ -0.3
Nubp1Q9R060 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.15□□□□□ -0.3
Nubp1Q9R060 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nubp1Q9R060 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Gm25144-201ENSMUST00000179561 110 ntBASIC13.14□□□□□ -0.31
Nubp1Q9R060 Gm25352-201ENSMUST00000179815 110 ntBASIC13.14□□□□□ -0.31
Nubp1Q9R060 Gm27989-201ENSMUST00000184721 107 ntBASIC13.14□□□□□ -0.31
Nubp1Q9R060 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nubp1Q9R060 Gm5779-201ENSMUST00000218467 910 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms